BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB019A06LP1|AL427413
(994 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1740 1938 0.0
3x_Contig1540 109 9e-24
>3x_Contig1740
Length = 21823
Score = 1938 bits (975), Expect = 0.0
Identities = 989/995 (99%), Gaps = 1/995 (0%)
Strand = Plus / Minus
Query: 1 gatcatcagacatggtttgtactacgctatttgcaattatggtgcctggacacaaccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13172 gatcatcagacatggtttgtactacgctatttgcaattatggtgcctggacacaaccttt 13113
Query: 61 ggttactttgtattatttgaactacattaccaagtttatcgaatttatcgacactatatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13112 ggttactttgtattatttgaactacattaccaagtttatcgaatttatcgacactatatt 13053
Query: 121 cttggtcttgaagcacaagaaattgacatttttgcacacttaccaccacggtgctactgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 13052 cttggtcttgaagcacaagaaattgacatttttgcacacttaccaccacggtgctactgc 12993
Query: 181 gttactatgtttcactcaattggtcggtaccacggctatatcatgggttccaatttctct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12992 gttactatgtttcactcaattggtcggtaccacggctatatcatgggttccaatttctct 12933
Query: 241 gaacttgggtgtccacgttgtcatgtactggtactacttcttggcagctagaggtattag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12932 gaacttgggtgtccacgttgtcatgtactggtactacttcttggcagctagaggtattag 12873
Query: 301 agtttggtggaaagaatgggttacaagattccaaatcatccaattcgttgttgacatatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12872 agtttggtggaaagaatgggttacaagattccaaatcatccaattcgttgttgacatatg 12813
Query: 361 cttcatttatttcgcggtttggcaaaaggttgctactgattatttcccaagcctaccaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12812 cttcatttatttcgcggtttggcaaaaggttgctactgattatttcccaagcctaccaca 12753
Query: 421 ttgcggttcttgtgtcggttcgactactgccactttctctggatgcgccatcatctcttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12752 ttgcggttcttgtgtcggttcgactactgccactttctctggatgcgccatcatctcttc 12693
Query: 481 ttacttatttttattcattgcattttacattgaagtgtacagacgtcaaggcacaaagaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12692 ttacttatttttattcattgcattttacattgaagtgtacagacgtcaaggcacaaagaa 12633
Query: 541 gtctaaggttgttaaaagagttcgtggtggtgttgcagctaaggttaacgaatatgtgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12632 gtctaaggttgttaaaagagttcgtggtggtgttgcagctaaggttaacgaatatgtgaa 12573
Query: 601 tgtcgatttgaagaatgtgagttctccctctccttctccagctccaagaaagagaaatac 660
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 12572 tgtcgatttgaagaatgtgagtactccctctccttctccagctccaagaaagagaaatac 12513
Query: 661 tagatctaagaaggcataaatacatgtttttgcatgtdaacgttgtaatattcaacacac 720
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 12512 tagatctaagaaggcataaatacatgtttttgcatgtaaacgttgtaatattcaacacac 12453
Query: 721 gctatcattttttattctcttctcttcatccttgtttatttatgttacat-tttcttatg 779
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 12452 gctatcattttttattctcttctcttcatccttgtttatttatgttacatatttcttatg 12393
Query: 780 gatgttttaccttcaataggtttcctgtcatgatttggtacgaaagagaactcacgtaga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 12392 gatgttttaccttcaataggtttcctgtcatgatttggtacgaaagagaactcacgtaga 12333
Query: 840 taactagaaatttagcctcttttgtaagthactattgattgacgttcaagattactctga 899
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 12332 taactagaaatttagcctcttttgtaagtaactattgattgacgttcaagattactctga 12273
Query: 900 cgtttgttttgaagaaagtttgaatatgtygtgtattataaagatatcgatatgcttytt 959
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 12272 cgtttgttttgaagaaagtttgaatatgtcgtgtattataaagatatcgatatgcttctt 12213
Query: 960 acacaactaaactttggattcaatatcttttgatc 994
|||||||||||||||||||||||||||||||||||
Sbjct: 12212 acacaactaaactttggattcaatatcttttgatc 12178
>3x_Contig1540
Length = 9505
Score = 109 bits (55), Expect = 9e-24
Identities = 94/107 (87%)
Strand = Plus / Plus
Query: 240 tgaacttgggtgtccacgttgtcatgtactggtactacttcttggcagctagaggtatta 299
||||||| ||||| || || ||||||||||||||||||||||| || ||||||||||
Sbjct: 3401 tgaacttaggtgtgcatgtcgtcatgtactggtactacttcttaagtgccagaggtatta 3460
Query: 300 gagtttggtggaaagaatgggttacaagattccaaatcatccaattc 346
|||| ||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 3461 gagtctggtggaaagaatgggtcaccagattccaaatcattcaattc 3507
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8352
Number of Sequences: 1807
Number of extensions: 8352
Number of successful extensions: 67
Number of sequences better than 1.0e-20: 2
length of query: 994
length of database: 10,358,551
effective HSP length: 16
effective length of query: 978
effective length of database: 10,329,639
effective search space: 10102386942
effective search space used: 10102386942
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)